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Astera

Research Scientist/Engineer, Deep Brain Two Photon Imaging and Optogenetics

Emeryville HQ$135k–$220kfulltimemidAdded today

About this role

Join Astera Neuro to develop cutting-edge optical implants for high-resolution two-photon imaging and optogenetics in deep primate brain structures. This role spans optical engineering, surgical innovation, and computational neuroscience to decode neural codes underlying cognition at single-cell resolution.

What you'll do

  • Design and optimize GRIN lens and microprism assemblies for deep brain imaging in primates, validated in rodents
  • Develop and execute surgical implantation procedures for optical implants
  • Conduct two-photon imaging and holographic photostimulation experiments with closed-loop control
  • Lead computational analysis of large-scale neural population data using dimensionality reduction, decoding, and circuit inference
  • Manage viral and transgenic expression strategies for opsins and calcium indicators
  • Mentor research associates and technicians; contribute to publications and open science initiatives

What they're looking for

  • In vivo two-photon calcium imaging and holographic optogenetics
  • Rodent and/or primate survival surgery and stereotaxic injections
  • Two-photon system operation, optical alignment, and characterization
  • Python or MATLAB for neural data analysis (Suite2p, CaImAn, or equivalent)
  • ZEMAX optical modeling
  • Ultrafast pulsed laser systems and nonlinear optics
  • Systems neuroscience and closed-loop experimental design
  • Leadership and mentoring in research environments
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Astera

Astera builds advanced infrastructure for large-scale distributed simulations, neuroscience research tools, and knowledge-sharing platforms aimed at accelerating scientific discovery. The company is hiring software engineers, ML researchers, and scientist-engineers to develop high-performance systems, specialized neuroscience instrumentation, and data-efficient machine learning approaches.

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Likely interview questions

  • Walk us through a two-photon imaging or optogenetics experiment you've designed end-to-end—what were the key technical challenges and how did you solve them?
  • Describe your experience with GRIN lens systems or other deep-brain optical approaches. What limitations have you encountered and how would you address them?